In Horizon 2020 are there guidelines that recommend how IPR should be handled within a consortium?

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The European Commission has created an online manual for Horizon 2020, which will feature an intellectual property guide.

The H2020 online manual is currently being updated and can be accessed from the following URL:

 http://ec.europa.eu/research/participants/portal/desktop/en/funding/guide.html

The H2020 Annotated Model Grant Agreement is a guide published by the European Commission with the aim to help users to understand and interpret the Grant Agreement clauses, including those related to intellectual property. 

Additionally it provides useful examples and practices. This document is still being completed.